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emzed.spyder

emzed.spyder is a customized distribution of the Spyder IDE for the emzed mass spectrometry platform, developed at ETH Zurich Scientific IT Services.

It provides a ready-to-use Python environment with emzed preloaded, a project management system with isolated virtual environments, and an integrated workflow for developing and publishing emzed extensions.

emzed.spyder screenshot

Quick start

Download and run the installer — it sets everything up automatically, including Python and all dependencies.

python -m venv emzed-env
source emzed-env/bin/activate
pip install emzed-spyder
emzed.spyder

On first startup, emzed.spyder will download and install the emzed packages into a dedicated environment. This can take a few minutes.

See Installation for full details.